Plant Transcript Assembly Report for TA39660_4513

Plant Transcript Assemblies represent a non-redundant set of transcripts through clustering and assembly of full-length and partial cDNAs, Expressed Sequence Tags (ESTs) and known mRNAs excluding the predicted CDS sequences derived from genome sequencing projects.

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Show TA39660_4513 Sequence - Show TA39660_4513 Assembly Diagram - Assembly Components Table - Putative SSRs

Plant Transcript TA39660_4513 Summary
Plant TA Accession TA39660_4513
Length 936
Orientation +
Num. of Components 12
Taxon ID 4513
Scientific Name Hordeum vulgare
Common Name Barley
Release Version 2
Most Current Build? Yes
Plant Transcript TA39660_4513 Annotation
Plant TA Annotation% Identity% Coverage
OSJNBb0072N21.7 protein [Oryza sativa (japonica cultivar-group)]81.9967.77
Plant Transcript TA39660_4513 Assembly Diagram
Plant Transcript Assembly TA39660_4513 Assembly Components
GenBank
Accession		 Type Left
Coord		 Right
Coord		 Orient Current TA
BM375732 EST 29 300 + TA39660_4513
CK123441 EST 29 545 + TA39660_4513
BY849453 EST 217 587 + TA39660_4513
CB861591 EST 1 612 + TA39660_4513
BM372690 EST 94 617 + TA39660_4513
BM372691 EST 94 636 + TA39660_4513
BQ766488 EST 242 868 + TA39660_4513
CX627197 EST 585 882 - TA39660_4513
BM445118 EST 497 894 + TA39660_4513
CB862245 EST 410 932 - TA39660_4513
BM443693 EST 497 936 + TA39660_4513
BY870432 EST 758 911 - TA39660_4513
Click to show/hide SSR data.

Plant Transcript TA39660_4513 Putative SSRs

No SSRs for TA39660_4513 found.

Plant Transcript Assembly TA39660_4513 Sequence

>TA39660_4513
CACGCGTCCGAGCAGATTGCGGTTTGTCCAAATGGAGGGTTCGAGCGGCGACTCGCCGCC
GGCGCCGCCGCCCGCCTTCCGGAACAGGTACTGGATCCTCCGCCACGGCCGCAGCGTCCC
CAACGAGCGCGGCCTCATCGTCTCCTCCCTGGAGAACGGCACGAAGCCGGAGTTCGGGCT
GGCCCCGGAGGGCGTCGAGCAGGCGCGCTCCGCCGGCGAGTCGCTCCGGAAGGAGCTTGA
GGAGATGGGTGTGCCGGTAGACTCTGTCAAGATCCGGTATTCGCCGTTCTCGCGGACGAC
AGAGACGGCCAGGGTGGTCGCTGGTGTGCTGGGCGTCCCATTTGAGGGTCCTAGCTGCAA
GGCAACCGTGGAACTTCGTGAACGTTATTTTGGACCATCATATGAGTTGCTTTCACACGA
GAAGTATGCAGAGGTATGGGCGATAGATGAAGCAGATCCCTTTCTGGCTCCAGAAGGTGG
GGAGAGTGTTGCAGATGTTGCTAGTAGACTTGCAGGGGTGCTGTCTTCTACAGACGTGGA
GTTTCATGGCTCTGCTGTTCTTATTGTCAGCCATGGGGATCCACTACAGATCTTTCAAGC
AGTGCTCAGTGGAGCCAAGGAAAACCCATCTTTCCTCGACAAGGTAGCTGGCCTGAAAAA
GGAAAGCCTGATAGTTCCATCCGTGTTGTCGCAGCACCGCAAGTTCGCACTCAACACAGG
AGAGCTGCGTCGAGTCGTGTGACCCGACACAGATTTGATCATATGCTCATATGTCGTAGA
TAATTCATGTATCCGTAATTCCTTATGGAGAGTCTGATAAGATGGAAAAAATGTTGTTCG
ATGGCACTCCATTATTTTGGTTGATCAGATTGAAGATCTGCTTGTAACCGTGAAAAAAGA
GCACATGCACAAGAGATTGCTTTTGAATTTGATC