Plant Transcript Assembly Report for TA28886_4513

Plant Transcript Assemblies represent a non-redundant set of transcripts through clustering and assembly of full-length and partial cDNAs, Expressed Sequence Tags (ESTs) and known mRNAs excluding the predicted CDS sequences derived from genome sequencing projects.

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Show TA28886_4513 Sequence - Show TA28886_4513 Assembly Diagram - Assembly Components Table - Putative SSRs

Plant Transcript TA28886_4513 Summary
Plant TA Accession TA28886_4513
Length 958
Orientation -
Num. of Components 53
Taxon ID 4513
Scientific Name Hordeum vulgare
Common Name Barley
Release Version 2
Most Current Build? Yes
Plant Transcript TA28886_4513 Annotation
Plant TA Annotation% Identity% Coverage
Cold acclimation protein WCOR518 [Triticum aestivum (Wheat)]67.1642.45
Plant Transcript TA28886_4513 Assembly Diagram
Plant Transcript Assembly TA28886_4513 Assembly Components
GenBank
Accession		 Type Left
Coord		 Right
Coord		 Orient Current TA
BM376895 EST 38 213 - TA28886_4513
AL509260 EST 136 281 + TA28886_4513
BY869688 EST 14 354 + TA28886_4513
BM443769 EST 136 352 - TA28886_4513
BY872374 EST 22 407 + TA28886_4513
BM377312 EST 129 373 - TA28886_4513
BY870948 EST 111 373 + TA28886_4513
BY870996 EST 108 417 + TA28886_4513
BU988242 EST 136 377 - TA28886_4513
CB859855 EST 1 428 + TA28886_4513
BU980007 EST 136 432 - TA28886_4513
BU971131 EST 95 451 - TA28886_4513
BQ660646 EST 106 473 + TA28886_4513
BY868598 EST 22 424 + TA28886_4513
BY871191 EST 23 432 + TA28886_4513
BY869943 EST 35 473 + TA28886_4513
BY865658 EST 39 432 + TA28886_4513
BY870217 EST 109 425 + TA28886_4513
BY870615 EST 134 469 + TA28886_4513
BY874035 EST 101 466 + TA28886_4513
BY873576 EST 98 470 + TA28886_4513
CA022013 EST 35 432 - TA28886_4513
BQ756100 EST 202 455 - TA28886_4513
BY870681 EST 137 436 + TA28886_4513
BY871308 EST 136 455 + TA28886_4513
BY871031 EST 136 468 + TA28886_4513
BU987936 EST 95 481 - TA28886_4513
BU988620 EST 95 481 - TA28886_4513
BY873828 EST 95 488 + TA28886_4513
BU987584 EST 39 481 - TA28886_4513
BM373778 EST 200 504 - TA28886_4513
BU988772 EST 136 539 - TA28886_4513
CB859948 EST 1 575 + TA28886_4513
AL509608 EST 35 562 + TA28886_4513
CB858885 EST 39 563 + TA28886_4513
AL508694 EST 131 560 + TA28886_4513
AL511572 EST 104 559 + TA28886_4513
BU987976 EST 106 547 - TA28886_4513
BY872868 EST 136 567 + TA28886_4513
BQ464379 EST 101 617 - TA28886_4513
BI779665 EST 201 606 - TA28886_4513
BI779670 EST 185 609 - TA28886_4513
AL509508 EST 136 640 + TA28886_4513
BY867437 EST 109 652 + TA28886_4513
BQ656814 EST 109 690 + TA28886_4513
BI777839 EST 297 717 - TA28886_4513
BM098200 EST 136 724 - TA28886_4513
BU984370 EST 219 724 - TA28886_4513
BM375240 EST 191 749 - TA28886_4513
CK123297 EST 187 781 - TA28886_4513
BU987172 EST 217 781 - TA28886_4513
BU985271 EST 298 854 - TA28886_4513
CA022278 EST 297 958 - TA28886_4513
Click to show/hide SSR data.

Plant Transcript TA28886_4513 Putative SSRs

No SSRs for TA28886_4513 found.

Plant Transcript Assembly TA28886_4513 Sequence

>TA28886_4513
CGGCACGAGGCACCCGCCTCCCACGCCGCGCCCACCGCCGACTCCGCCGTACGGGCCTCC
CACGCCACTGCCACCGCCTTACGTGCCGCCCACGCCGCCCTACACCCCGCCGTCGCCACC
GTACATTCCGCCAAGCCCGCCGTACGTGCCACCAACGCCACTGCCTCCGCCGTACGTGCC
ACCATACGTCCCACCGACACCTCCATACACTCCTCCCTACGTGCCGCCAACCCCGCCATA
CGTCCCGCCGTCGCCGCCCTACGTGCCACCGACACCGCCATACACGCCGCCGTACGTGCC
GCCGCCGTCGCCGGGGAGGAAGACGTGCCCGATCGACGCGCTGAAGCTGAACGCGTGCGT
GGACGTGCTGAGCGGACTGGTGCACCTGGTGATCGGGCGGGAGGCGCGGAGCAAGTGCTG
CCCGCTGGTGCAGGGGGTGGCGGACCTGGACGCGGCGCTGTGCCTCTGCACCACCATCCG
GGCGCGGGTCCTCAACATCAACATCTACCTCCCGGTGGCGCTCCGGCTGCTCATCACCTG
CGGCAAGCACCCGCCCAACGGCTTCCAGTGCCCCACCGTCCTCGACGCCTAGCCTAGCCT
AGCCTGCATGGCCGCTCTGGCTCGGCTCTCGCCATAGCTTTACTACCATACTAGCGTGTG
GCGTGGGGTGCTACAGTGCTTGCTCGCTCCAGTGCTGTGCGTGCCTGCGATTTGTGTGCG
TCTCGATCGACCTCGACCGATTTTCTTGTTCCGTGTTAGTAGTGTGTAGGAGTGTGGCAA
CTCCATGTGGTTTCCGGCCAAGTGATGTTGAATAATTAATTAATTAACATGTGCTATTTA
GTACCGTACTAGCAAAAAGGTCCGTGTATTGTAACGGAAGAAAAAAAATTTATAATTTTC
AATTGTGATAATCACATTATGCTCTTAAAATTTTAAGACATTTTTTG