Current Release Summary

TIGR Plant Transcript Assemblies - latest update July, 2007

Showing assembly statistics for 254 species out of a total of 254. Click on a column header to sort by that column and again to sort in reverse order.

Taxon ID
Scientific Name
Common Name
EST Retrieval Date
Release
Transcript Assemblies Transcript Assembly Components Download
FASTA
Assemblies
Singletons
Total
EST
fl-cDNA
mRNA
Trash Count
35845 Acetabularia acetabulum - 2006-09-28 1 625 2585 3210 4314 22 19 97 Download
263995 Acorus americanus Sweetflag 2006-06-05 2 1308 5121 6429 9694 1 0 0 Download
13818 Adiantum capillus-veneris Maidenhair fern 2006-09-28 2 1545 6230 7775 10189 16 0 231 Download
4573 Aegilops speltoides Goatgrass 2006-09-28 2 628 2277 2905 4313 3 0 2 Download
204232 Agrostis capillaris Colonial bentgrass 2006-06-05 1 709 5207 5916 7428 0 0 0 Download
63632 Agrostis stolonifera Creeping bentgrass 2006-06-05 1 762 5420 6182 8875 3 0 0 Download
4679 Allium cepa Onion 2006-09-28 2 3578 9366 12944 19544 49 43 38 Download
13333 Amborella trichopoda - 2006-09-28 2 1024 5625 6649 8705 7 9 1 Download
4615 Ananas comosus Pineapple 2006-06-05 2 709 2923 3632 5649 23 23 0 Download
4151 Antirrhinum majus Snapdragon 2006-09-28 2 4221 9935 14156 24598 45 68 713 Download
4045 Apium graveolens Celery 2006-09-28 2 258 1405 1663 2119 17 24 95 Download
338618 Aquilegia formosa x Aquilegia pubescens Columbine 2006-06-05 2 12160 9534 21694 84314 0 1 0 Download
378006 Arabidopsis arenosa x Arabidopsis thaliana - 2006-09-28 1 134 1441 1575 1821 0 0 315 Download
3702 Arabidopsis thaliana Thale-cress 2006-06-05 2 27983 120385 148368 616064 65976 2204 0 Download
3818 Arachis hypogaea Peanut 2007-06-01 5 1491 5474 6965 13174 115 125 345 Download
217475 Arachis stenosperma - 2007-06-01 5 420 5058 5478 6238 0 80 26 Download
4686 Asparagus officinalis Garden asparagus 2006-06-05 2 1062 4987 6049 8421 41 8 0 Download
4498 Avena sativa Oat 2006-09-28 2 962 4729 5691 7616 35 37 16 Download
82927 Avicennia marina Grey mangrove 2006-09-28 2 250 1287 1537 1891 29 3 2 Download
161934 Beta vulgaris Beet 2007-06-01 5 3868 14554 18422 25834 81 99 911 Download
3505 Betula pendula European white birch 2006-09-28 2 432 728 1160 2510 11 92 38 Download
15368 Brachypodium distachyon Purple false brome 2006-06-05 1 2785 8359 11144 20323 1 0 0 Download
3708 Brassica napus Oilseed rape 2007-06-01 5 16608 36080 52688 148022 326 427 828 Download
3712 Brassica oleracea Cabbage 2007-06-01 5 6761 11918 18679 40151 7 197 1392 Download
3711 Brassica rapa Chinese cabbage 2007-06-01 5 4409 12928 17337 30680 259 252 126 Download
39984 Bruguiera gymnorrhiza Black mangrove 2007-06-01 5 2031 10110 12141 19808 11 5 565 Download
4442 Camellia sinensis Tea 2006-09-28 2 234 1581 1815 2148 59 22 24 Download
4072 Capsicum annuum Pepper 2006-09-28 2 4189 11215 15404 30830 271 135 259 Download
4222 Carthamus tinctorius - 2007-06-01 5 6232 18067 24299 40996 5 0 15 Download
3522 Casuarina glauca Gray sheoak 2006-09-28 1 157 1326 1483 1722 0 10 306 Download
4058 Catharanthus roseus - 2007-06-01 5 1109 5726 6835 9026 68 375 138 Download
215693 Centaurea maculosa - 2007-06-01 5 6110 20512 26622 39947 0 0 11 Download
347529 Centaurea solstitialis - 2007-06-01 5 6154 21596 27750 40399 0 0 8 Download
3225 Ceratodon purpureus Ceratodon moss 2006-09-28 2 365 679 1044 1667 3 3 11 Download
49495 Ceratopteris richardii Triangle waterfern 2006-09-28 2 408 4084 4492 5104 32 22 21 Download
13415 Chamaecyparis obtusa Hinoki false cypress 2006-06-05 1 1046 3015 4061 5830 2 0 0 Download
51695 Chlamydomonas incerta - 2006-09-28 1 393 918 1311 4662 38 23 470 Download
3055 Chlamydomonas reinhardtii Green algae 2006-09-28 2 11958 37555 49513 165559 449 128 2084 Download
3827 Cicer arietinum Chick pea 2006-09-28 1 94 1178 1272 1113 13 286 177 Download
114280 Cichorium endivia - 2007-06-01 5 4098 18414 22512 30154 0 0 17 Download
13427 Cichorium intybus Chicory 2007-06-01 5 6501 20190 26691 41673 8 24 77 Download
3654 Citrullus lanatus - 2007-06-01 5 146 1327 1473 1742 22 29 7 Download
43166 Citrus aurantium Sour orange 2006-09-28 2 829 2584 3413 5048 0 2 12 Download
85681 Citrus clementina Clementine 2006-09-28 2 5222 43167 48389 61091 0 3 313 Download
307631 Citrus clementina x Citrus tangerina - 2006-09-28 2 155 1106 1261 1712 0 0 54 Download
307630 Citrus macrophylla Rough lemon 2006-09-28 2 77 89 166 1049 0 0 27 Download
171252 Citrus reshni Cleopatra mandarin 2006-09-28 2 188 2220 2408 2840 0 1 27 Download
85571 Citrus reticulata Mandarine orange 2006-09-28 2 688 1386 2074 3618 1 4 22 Download
322160 Citrus reticulata x Citrus temple Temple mandarin 2006-09-28 2 225 1109 1334 1823 0 0 0 Download
2711 Citrus sinensis Sweet orange 2006-09-28 2 11061 18222 29283 93395 56 59 531 Download
105581 Citrus sinensis x Poncirus trifoliata Citrange 2006-09-28 2 102 756 858 1021 0 2 31 Download
55188 Citrus unshiu Satsuma orange 2007-06-01 5 428 2307 2735 4439 53 15 50 Download
37656 Citrus x paradisi Grapefruit 2006-06-05 2 1087 3819 4906 7974 26 7 0 Download
309804 Citrus x paradisi x Poncirus trifoliata Citrumelo 2006-09-28 2 2026 1511 3537 7938 0 0 16 Download
34146 Closterium peracerosum-strigosum-littorale complex - 2006-06-05 2 408 1308 1716 3228 1 7 0 Download
13443 Coffea arabica Coffee arabica 2006-09-28 2 80 1010 1090 1064 27 109 7 Download
49390 Coffea canephora Coffee robusta 2007-06-01 5 6732 14897 21629 55301 41 37 391 Download
3369 Cryptomeria japonica Japanese cedar 2006-06-05 2 2763 6335 9098 16187 43 3 0 Download
3656 Cucumis melo Common melon 2006-06-05 1 829 2505 3334 5581 62 60 0 Download
3659 Cucumis sativus Cucumber 2006-09-28 2 631 3299 3930 5127 127 128 144 Download
136217 Curcuma longa Turmeric 2006-06-05 1 2978 4072 7050 12565 0 0 0 Download
3832 Cyamopsis tetragonoloba - 2007-06-01 5 1623 6038 7661 16063 2 4 413 Download
58031 Cycas rumphii Cycad 2006-09-28 2 927 3408 4335 7899 0 0 162 Download
87530 Cyclamen persicum Cyclamen 2006-06-05 1 26 2016 2042 2068 0 0 0 Download
28909 Cynodon dactylon Bermudagrass 2006-09-28 2 189 1725 1914 3963 18 26 577 Download
89411 Descurainia sophia Herb sophia 2006-09-28 2 66 814 880 989 2 0 34 Download
3046 Dunaliella salina - 2006-06-05 2 416 1801 2217 3764 35 12 0 Download
51953 Elaeis guineensis African oil palm 2006-09-28 2 139 1806 1945 2081 44 38 381 Download
80265 Elaeis oleifera - 2007-06-01 5 259 2411 2670 3137 8 32 68 Download
4511 Eleusine coracana Finger millet 2006-06-05 1 131 1386 1517 1704 0 4 0 Download
110835 Eragrostis tef Teff 2006-09-28 2 363 1714 2077 2813 0 3 3 Download
3467 Eschscholzia californica California poppy 2006-09-28 2 1239 5299 6538 9082 13 8 1 Download
34317 Eucalyptus globulus - 2007-06-01 5 407 352 759 3481 14 51 462 Download
71139 Eucalyptus grandis Grand eucalyptus 2006-09-28 2 4 1554 1558 1545 16 1 29 Download
3933 Eucalyptus gunnii - 2007-06-01 5 1573 2531 4104 8324 3 9 214 Download
183855 Eucalyptus tereticornis Forest redgum 2006-09-28 2 1 1124 1125 1126 0 0 5 Download
3993 Euphorbia esula Leafy spurge 2006-09-28 2 9905 18820 28725 47497 26 14 46 Download
142860 Euphorbia tirucalli Indiantree spurge 2006-09-28 2 1084 5770 6854 9278 2 8 23 Download
4606 Festuca arundinacea Tall fescue 2006-06-05 2 6297 15718 22015 43952 11 19 0 Download
57918 Fragaria vesca Woodland strawberry 2007-12-12 3 4825 8624 13449 45085 0 0 0 Download
3747 Fragaria x ananassa Strawberry 2006-09-28 2 358 4776 5134 5327 128 130 50 Download
18101 Gerbera hybrid cultivar - 2006-09-28 2 2381 7101 9482 16859 8 19 138 Download
3311 Ginkgo biloba Ginkgo 2006-09-28 2 830 3348 4178 5940 45 18 310 Download
3847 Glycine max Soybean 2006-09-28 2 36399 80566 116965 351935 815 537 7223 Download
3848 Glycine soja Wild soybean 2006-06-05 2 2443 9185 11628 18419 10 3 0 Download
3382 Gnetum gnemon Melinjo 2006-09-28 2 418 2441 2859 3920 0 27 320 Download
29729 Gossypium arboreum Tree cotton 2006-09-28 2 4591 22292 26883 39157 19 11 73 Download
3634 Gossypium barbadense - 2007-06-01 5 58 922 980 1010 42 44 13 Download
3635 Gossypium hirsutum Upland cotton 2006-09-28 3 24797 45870 70667 176521 323 151 509 Download
29730 Gossypium raimondii - 2006-09-28 2 8665 19977 28642 63265 5 1 312 Download
219666 Hedyotis centranthoides Forest starviolet 2006-09-28 2 541 3884 4425 5311 0 0 105 Download
219667 Hedyotis terminalis Variable starviolet 2006-09-28 2 402 3774 4176 4811 0 0 64 Download
4232 Helianthus annuus Common sunflower 2006-06-05 2 10219 34443 44662 93279 145 78 0 Download
73275 Helianthus argophyllus Silverleaf sunflower 2006-09-28 2 4792 16402 21194 34552 0 0 103 Download
73280 Helianthus ciliaris - 2007-06-01 5 3070 13780 16850 21584 0 0 6 Download
400408 Helianthus exilis Serpentine sunflower 2006-09-28 1 5187 17572 22759 32818 0 0 9 Download
73304 Helianthus paradoxus Paradox sunflower 2007-06-01 5 3864 17300 21164 30482 0 0 35 Download
4234 Helianthus petiolaris Prairie sunflower 2006-06-05 1 3994 11718 15712 27456 0 0 0 Download
4233 Helianthus tuberosus - 2007-06-01 5 5845 21790 27635 40348 16 16 14 Download
145475 Helicosporidium sp. ex Simulium jonesii - 2006-09-28 2 191 543 734 1164 11 26 32 Download
3981 Hevea brasiliensis Rubber tree 2006-09-28 1 1317 2521 3838 10344 105 190 436 Download
4513 Hordeum vulgare Barley 2006-06-05 2 30171 93180 123351 456410 861 448 0 Download
4120 Ipomoea batatas Sweetpotato 2006-09-28 3 2472 6695 9167 17805 133 71 252 Download
35883 Ipomoea nil Morning glory 2006-06-05 2 11216 11124 22340 61354 59 23 0 Download
35884 Ipomoea trifida - 2006-09-28 2 238 670 908 1379 11 2 28 Download
432290 Juglans hindsii x Juglans regia - 2007-06-01 5 1664 6156 7820 12753 0 0 41 Download
51240 Juglans regia English walnut 2006-09-28 2 713 2081 2794 4938 8 5 87 Download
43195 Lactuca perennis Perennial lettuce 2006-06-05 1 4485 9231 13716 29108 0 0 0 Download
75948 Lactuca saligna Willow leaf lettuce 2006-06-05 1 4999 7904 12903 30680 0 0 0 Download
4236 Lactuca sativa Garden lettuce 2006-06-05 1 11215 21900 33115 80681 46 39 0 Download
75943 Lactuca serriola Prickly lettuce 2006-06-05 1 7125 17824 24949 55450 0 0 0 Download
75947 Lactuca virosa Wild lettuce 2006-06-05 1 4912 8705 13617 30033 0 0 0 Download
52714 Leymus chinensis - 2006-09-28 2 152 1241 1393 1668 3 4 24 Download
293754 Limonium bicolor Bunge 2007-06-01 5 1864 61 1925 4686 4 0 165 Download
4006 Linum usitatissimum Common flax 2006-06-05 2 546 4302 4848 5939 15 19 0 Download
3415 Liriodendron tulipifera Tuliptree 2006-06-05 2 1129 5958 7087 9528 5 2 0 Download
4521 Lolium multiflorum Italian ryegrass 2006-09-28 2 637 3460 4097 5713 2 24 139 Download
34176 Lolium temulentum Bearded darnel 2006-06-05 1 851 2819 3670 5717 6 7 0 Download
34305 Lotus japonicus - 2006-09-28 1 14461 28462 42923 148617 133 93 2014 Download
3870 Lupinus albus White lupin 2006-09-28 2 235 1578 1813 2112 29 29 16 Download
272140 Lycoris longituba Long-tube surprise-lily 2006-09-28 2 1384 2728 4112 7761 0 0 48 Download
106566 Malus sieboldii Toringo crab-apple 2006-09-28 2 136 782 918 1209 0 0 0 Download
3750 Malus x domestica Cultivated apple 2006-06-05 2 26757 50847 77604 249964 264 202 0 Download
339852 Malus x domestica x Malus sieversii - 2006-09-28 2 375 2869 3244 3916 0 0 28 Download
3983 Manihot esculenta Cassava 2007-06-01 5 5189 10214 15403 36073 43 30 47 Download
3197 Marchantia polymorpha Liverwort 2006-09-28 2 3874 6847 10721 33400 10 15 292 Download
3879 Medicago sativa Alfalfa 2007-06-01 5 861 3558 4419 6994 185 288 551 Download
3880 Medicago truncatula Barrel medic 2006-06-05 2 20414 34768 55182 217148 251 439 0 Download
34256 Mentha piperita Peppermint 2006-09-28 2 115 919 1034 1291 21 5 25 Download
3544 Mesembryanthemum crystallinum Common iceplant 2006-09-28 2 2897 9704 12601 27191 134 74 157 Download
41882 Mesostigma viride - 2006-09-28 2 1886 5884 7770 15430 2 9 542 Download
392814 Micromonas sp. CCMP490 - 2006-09-28 1 435 1708 2143 3529 0 0 133 Download
4155 Mimulus guttatus Seep monkeyflower 2006-06-05 2 1815 6493 8308 13441 3 3 0 Download
4641 Musa acuminata Cavendish banana 2007-06-01 5 1228 5777 7005 8938 64 231 93 Download
4432 Nelumbo nucifera - 2007-06-01 5 257 1427 1684 2189 17 39 18 Download
4100 Nicotiana benthamiana - 2007-06-01 5 4836 12354 17190 35364 80 163 207 Download
164110 Nicotiana langsdorffii x Nicotiana sanderae - 2006-06-05 1 1291 5916 7207 12443 5 18 0 Download
4096 Nicotiana sylvestris South American tobacco 2006-09-28 2 669 6106 6775 7818 38 35 764 Download
4097 Nicotiana tabacum Cultivated tobacco 2007-06-01 5 10693 33868 44561 87430 1720 964 1887 Download
77108 Nuphar advena Yellow pond-lily 2006-06-05 2 1199 6945 8144 10204 1 5 0 Download
39350 Ocimum basilicum Sweet basil 2006-06-05 1 3343 6556 9899 23088 20 0 0 Download
63629 Oryza minuta - 2006-09-28 2 579 3232 3811 5512 3 0 248 Download
4530 Oryza sativa Rice 2006-06-05 2 49870 197646 247516 1169591 34559 888 0 Download
242159 Ostreococcus 'lucimarinus' - 2007-06-01 5 492 15688 16180 17592 0 0 0 Download
4054 Panax ginseng Ginseng 2006-06-05 2 560 4345 4905 6310 46 16 0 Download
38727 Panicum virgatum Switchgrass 2006-09-28 2 1668 5970 7638 11961 0 0 29 Download
4543 Pennisetum glaucum Pearl millet 2006-09-28 2 176 2290 2466 2804 15 21 44 Download
3435 Persea americana Avocado 2006-09-28 2 1109 5591 6700 8735 23 15 0 Download
33119 Petunia axillaris - 2007-06-01 5 219 531 750 1696 11 1 0